{
  "_id": "6a1ed95eb401979e7340f326",
  "Package": "TMTI",
  "Type": "Package",
  "Title": "Too Many, Too Improbable (TMTI) Test Procedures",
  "Version": "1.0.3",
  "Author": "Phillip B. Mogensen [aut, cre]",
  "Authors@R": "person(given = c(\"Phillip\", \"B.\"),\nfamily = \"Mogensen\",\nrole = c(\"aut\", \"cre\"),\nemail = \"pbm@math.ku.dk\")",
  "Maintainer": "Phillip B. Mogensen <pbm@math.ku.dk>",
  "Description": "Methods for computing joint tests, controlling the\nFamilywise Error Rate (FWER) and getting lower bounds on the\nnumber of false hypotheses in a set. The methods implemented\nhere are described in Mogensen and Markussen (2021)\n<doi:10.48550/arXiv.2108.04731>.",
  "License": "MIT + file LICENSE",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.2.0",
  "Repository": "https://phillipmogensen.r-universe.dev",
  "Date/Publication": "2024-10-25 22:13:35 UTC",
  "RemoteUrl": "https://github.com/phillipmogensen/tmti",
  "RemoteRef": "HEAD",
  "RemoteSha": "29a44d2ef6f0c9e66f8f3df441111dbdad0a4aaa",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-05-20 09:23:34 UTC",
    "User": "root"
  },
  "MD5sum": "2e6207e3be52385caa0bec25ec66b694",
  "_user": "phillipmogensen",
  "_type": "src",
  "_file": "TMTI_1.0.3.tar.gz",
  "_fileid": "2f6d7c01b6c3f33930997f38d98ce7f15f4bcb8606d1ab6fd33e6660cd1bf3f6",
  "_filesize": 182546,
  "_sha256": "2f6d7c01b6c3f33930997f38d98ce7f15f4bcb8606d1ab6fd33e6660cd1bf3f6",
  "_created": "2026-05-20T09:23:34.000Z",
  "_published": "2026-06-02T13:23:42.235Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79080808999,
      "time": 126,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7106205196"
    },
    {
      "job": 79080808872,
      "time": 119,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7106202345"
    },
    {
      "job": 79080809198,
      "time": 127,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7106205310"
    },
    {
      "job": 79080808998,
      "time": 118,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7106202025"
    },
    {
      "job": 79080809282,
      "time": 223,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7106231875"
    },
    {
      "job": 79080808922,
      "time": 299,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7106259529"
    },
    {
      "job": 79080808822,
      "time": 157,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7106206209"
    },
    {
      "job": 79080808727,
      "time": 222,
      "config": "macos-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7106230933"
    },
    {
      "job": 79080808689,
      "time": 203,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7106156958"
    },
    {
      "job": 79080807799,
      "time": 95,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7358902936"
    },
    {
      "job": 79080808787,
      "time": 119,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7106202395"
    },
    {
      "job": 79080808713,
      "time": 94,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7106193499"
    },
    {
      "job": 79080808739,
      "time": 118,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7106202293"
    }
  ],
  "_buildurl": "https://github.com/r-universe/phillipmogensen/actions/runs/26153403854",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/phillipmogensen/tmti",
  "_commit": {
    "id": "29a44d2ef6f0c9e66f8f3df441111dbdad0a4aaa",
    "author": "phillipmogensen <phillip@glxanalytix.com>",
    "committer": "phillipmogensen <phillip@glxanalytix.com>",
    "message": "updated to fit CRAN requirements\n",
    "time": 1729894415
  },
  "_maintainer": {
    "name": "Phillip B. Mogensen",
    "email": "pbm@math.ku.dk"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "Rcpp",
      "role": "Imports"
    },
    {
      "package": "parallel",
      "role": "Suggests"
    }
  ],
  "_owner": "phillipmogensen",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "phillipmogensen",
      "count": 5,
      "uuid": 31769507
    }
  ],
  "_userbio": {
    "uuid": 31769507,
    "type": "user",
    "name": "Phillip Bredahl Colliander"
  },
  "_downloads": {
    "count": 596,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/TMTI"
  },
  "_devurl": "https://github.com/phillipmogensen/tmti",
  "_searchresults": 0,
  "_topics": [
    "cpp"
  ],
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/readme.html",
    "extra/readme.md",
    "extra/TMTI.html",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/phillipmogensen/tmti",
  "_realowner": "phillipmogensen",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2021-08-13"
    },
    {
      "version": "1.0.0",
      "date": "2022-08-07"
    },
    {
      "version": "1.0.1",
      "date": "2022-08-10"
    },
    {
      "version": "1.0.3",
      "date": "2024-10-29"
    }
  ],
  "_exports": [
    "adjust_LocalTest",
    "adjust_TMTI",
    "CTP_LocalTest",
    "CTP_TMTI",
    "gamma_bootstrapper",
    "gamma_bootstrapper_Ttest",
    "kFWER_LocalTest",
    "kFWER_TMTI",
    "localTest_CTP",
    "rtTMTI_CDF",
    "TestSet_localTest",
    "TestSet_LocalTest",
    "TestSet_TMTI",
    "TMTI",
    "TMTI_CDF",
    "TMTI_CTP",
    "TopDown_localTest",
    "TopDown_LocalTest",
    "TopDown_TMTI",
    "tTMTI_CDF"
  ],
  "_help": [
    {
      "page": "adjust_LocalTest",
      "title": "Adjust all p-values using a Closed Testing Procedure and a user-defined local test which satisfies the quadratic shortcut given in Mogensen and Markussen (2021)",
      "topics": [
        "adjust_LocalTest"
      ]
    },
    {
      "page": "adjust_TMTI",
      "title": "Adjust all p-values using a Closed Testing Procedeure and the TMTI family of tests.",
      "topics": [
        "adjust_TMTI"
      ]
    },
    {
      "page": "CTP_LocalTest",
      "title": "A Closed Testing Procedure for any local test satisfying the conditions of Mogensen and Markussen (2021) using an O(n^2) shortcut.",
      "topics": [
        "CTP_LocalTest",
        "localTest_CTP"
      ]
    },
    {
      "page": "CTP_TMTI",
      "title": "A Closed Testing Procedure for the TMTI using an O(n^2) shortcut",
      "topics": [
        "CTP_TMTI",
        "TMTI_CTP"
      ]
    },
    {
      "page": "FullCTP_C",
      "title": "Leading NA",
      "topics": [
        "FullCTP_C"
      ]
    },
    {
      "page": "FWER_set_C",
      "title": "Leading NA",
      "topics": [
        "FWER_set_C"
      ]
    },
    {
      "page": "gamma_bootstrapper",
      "title": "Function to bootstrap the Cumulative Distribution Functions (CDFs) of the TMTI statistics.",
      "topics": [
        "gamma_bootstrapper"
      ]
    },
    {
      "page": "gamma_bootstrapper_Ttest",
      "title": "Compute a list of TMTI CDFs for one- and two-sample test scenarios",
      "topics": [
        "gamma_bootstrapper_Ttest"
      ]
    },
    {
      "page": "kFWER_LocalTest",
      "title": "kFWER_LocalTest. Computes the largest rejection set possible with kFWER control.",
      "topics": [
        "kFWER_LocalTest"
      ]
    },
    {
      "page": "kFWER_set_C",
      "title": "Leading NA",
      "topics": [
        "kFWER_set_C"
      ]
    },
    {
      "page": "kFWER_TMTI",
      "title": "kFWER_TMTI. Computes the largest rejection set possible with kFWER control.",
      "topics": [
        "kFWER_TMTI"
      ]
    },
    {
      "page": "MakeY_C",
      "title": "Leading NA",
      "topics": [
        "MakeY_C"
      ]
    },
    {
      "page": "MakeZ_C",
      "title": "Leading NA",
      "topics": [
        "MakeZ_C"
      ]
    },
    {
      "page": "MakeZ_C_nsmall",
      "title": "Leading NA",
      "topics": [
        "MakeZ_C_nsmall"
      ]
    },
    {
      "page": "rtTMTI_CDF",
      "title": "Computes the analytical version of the rtMTI_infty CDF. When m>100, this should not be used.",
      "topics": [
        "rtTMTI_CDF"
      ]
    },
    {
      "page": "TestSet_C",
      "title": "Leading NA",
      "topics": [
        "TestSet_C"
      ]
    },
    {
      "page": "TestSet_LocalTest",
      "title": "Test a subset of hypotheses in its closure using a user-specified local test",
      "topics": [
        "TestSet_LocalTest",
        "TestSet_localTest"
      ]
    },
    {
      "page": "TestSet_TMTI",
      "title": "Test a subset of hypotheses in its closure using the TMTI",
      "topics": [
        "TestSet_TMTI"
      ]
    },
    {
      "page": "TMTI",
      "title": "Computes the TMTI test for a joint hypothesis given input p-values.",
      "topics": [
        "TMTI"
      ]
    },
    {
      "page": "TMTI_CDF",
      "title": "Computes the analytical version of the TMTI_infty CDF. When m>100, this should not be used.",
      "topics": [
        "TMTI_CDF"
      ]
    },
    {
      "page": "TopDown_C",
      "title": "Leading NA",
      "topics": [
        "TopDown_C"
      ]
    },
    {
      "page": "TopDown_C_binary",
      "title": "Leading NA",
      "topics": [
        "TopDown_C_binary"
      ]
    },
    {
      "page": "TopDown_C_binary_subset",
      "title": "Leading NA",
      "topics": [
        "TopDown_C_binary_subset"
      ]
    },
    {
      "page": "TopDown_LocalTest",
      "title": "TopDown LocalTest algorithm for estimating a 1-alpha confidence set for the number of false hypotheses among a set.",
      "topics": [
        "TopDown_LocalTest",
        "TopDown_localTest"
      ]
    },
    {
      "page": "TopDown_TMTI",
      "title": "TopDown TMTI algorithm for estimating a 1-alpha confidence set for the number of false hypotheses among a set.",
      "topics": [
        "TopDown_TMTI"
      ]
    },
    {
      "page": "tTMTI_CDF",
      "title": "Computes the analytical version of the tTMTI_infty CDF. When m>100, this should not be used.",
      "topics": [
        "tTMTI_CDF"
      ]
    }
  ],
  "_readme": "https://github.com/phillipmogensen/tmti/raw/HEAD/README.md",
  "_rundeps": [
    "Rcpp"
  ],
  "_sysdeps": [
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "14.2.0-4ubuntu2~24.04.1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_score": 2.6989700043360187,
  "_indexed": true,
  "_nocasepkg": "tmti",
  "_universes": [
    "phillipmogensen"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.3",
      "date": "2026-05-20T09:25:44.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "29a44d2ef6f0c9e66f8f3df441111dbdad0a4aaa",
      "fileid": "9ad1fe6e765934419011fab390b7e33de039b60514468f570dfb57aca741a71c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/phillipmogensen/actions/runs/26153403854"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.3",
      "date": "2026-05-20T09:25:31.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "29a44d2ef6f0c9e66f8f3df441111dbdad0a4aaa",
      "fileid": "66b4fbf84cd799ddff896ea30198365063d4364aad55dfdfe75d7141b41c9887",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/phillipmogensen/actions/runs/26153403854"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0.3",
      "date": "2026-05-20T09:25:44.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "29a44d2ef6f0c9e66f8f3df441111dbdad0a4aaa",
      "fileid": "d9685b602315bae768dbce96069fbed5b7525a4c71680fdac5d0ba56fbcf0e9b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/phillipmogensen/actions/runs/26153403854"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0.3",
      "date": "2026-05-20T09:25:32.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "29a44d2ef6f0c9e66f8f3df441111dbdad0a4aaa",
      "fileid": "c3fb4c749f32bbfd5cccad4b74ea0f026b1ee368802ab686d091c2845929ad87",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/phillipmogensen/actions/runs/26153403854"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0.3",
      "date": "2026-05-20T09:26:54.000Z",
      "arch": "aarch64",
      "commit": "29a44d2ef6f0c9e66f8f3df441111dbdad0a4aaa",
      "fileid": "82e903c365b95676abb463352786d95be00a3f7df244e857179b032456b303c5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/phillipmogensen/actions/runs/26153403854"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0.3",
      "date": "2026-05-20T09:27:26.000Z",
      "arch": "x86_64",
      "commit": "29a44d2ef6f0c9e66f8f3df441111dbdad0a4aaa",
      "fileid": "6b731305a0b6d1f06a0716503eabc0717678fc63e7ecee3f713c44363baee7e8",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/phillipmogensen/actions/runs/26153403854"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.0.3",
      "date": "2026-05-20T09:25:44.000Z",
      "arch": "aarch64",
      "commit": "29a44d2ef6f0c9e66f8f3df441111dbdad0a4aaa",
      "fileid": "3d41c7a5504cb513bb5c794ca9d651acd4cd28c4aeab765e13a6945a23e004ca",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/phillipmogensen/actions/runs/26153403854"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.0.3",
      "date": "2026-05-20T09:26:35.000Z",
      "arch": "x86_64",
      "commit": "29a44d2ef6f0c9e66f8f3df441111dbdad0a4aaa",
      "fileid": "af756ae90354e007a077d5726d53523fad86cb9c518cd45167babf6a3195b81c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/phillipmogensen/actions/runs/26153403854"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0.3",
      "date": "2026-05-20T09:24:55.000Z",
      "arch": "x86_64",
      "commit": "29a44d2ef6f0c9e66f8f3df441111dbdad0a4aaa",
      "fileid": "0ba9261b712ea2bfd251c05dae2ae9aa32423a220cc795b1a10b194d9ae33da5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/phillipmogensen/actions/runs/26153403854"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.0.3",
      "date": "2026-05-20T09:24:45.000Z",
      "arch": "x86_64",
      "commit": "29a44d2ef6f0c9e66f8f3df441111dbdad0a4aaa",
      "fileid": "93f475ca0928fbacdb41521ea88a4645d5ce6bbf2f65517d914e96c0d28362bc",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/phillipmogensen/actions/runs/26153403854"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.0.3",
      "date": "2026-05-20T09:24:48.000Z",
      "arch": "x86_64",
      "commit": "29a44d2ef6f0c9e66f8f3df441111dbdad0a4aaa",
      "fileid": "33eaeddff8817362f15b2e3994b7efe64a83853ae19bb5b485f17528d1987ed5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/phillipmogensen/actions/runs/26153403854"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0.3",
      "date": "2026-06-02T13:23:10.000Z",
      "arch": "emscripten",
      "commit": "29a44d2ef6f0c9e66f8f3df441111dbdad0a4aaa",
      "fileid": "8f24959122b6667d76c16b524b66f8acd1afb9b6272e1ee63238f5ded2bb3895",
      "status": "success",
      "buildurl": "https://github.com/r-universe/phillipmogensen/actions/runs/26153403854"
    }
  ]
}